euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

160 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip80 chr1 17229461 17229461 . unknown germline . no 219 .
srip103 chr1 20996377 20996377 + unknown germline . no 219 KIF17
srip132 chr1 24775171 24775171 + unknown germline . no 219 NIPAL3
srip545 chr1 42483964 42483964 + unknown germline . no 219 HIVEP3
srip1802 chr1 75192898 75192898 - unknown germline . no 219 CRYZ
srip3055 chr1 102568916 102568916 + unknown germline . no 219 .
srip3899 chr1 119553359 119553359 + unknown germline . no 219 .
srip4124 chr1 149308428 149308428 + unknown germline . no 219 LOC645262
srip4857 chr1 166262935 166262935 + unknown germline . no 219 .
srip5046 chr1 169524864 169524864 + unknown germline . no 219 F5
srip5430 chr1 179575369 179575369 - unknown germline . no 219 TDRD5
srip5641 chr1 187525329 187525329 . unknown germline . no 219 .
srip5997 chr1 192262261 192262261 - unknown germline . no 219 .
srip6844 chr1 221827812 221827812 - unknown germline . no 219 .
srip7082 chr1 231007804 231007804 - unknown germline . no 219 .
srip8011 chr10 19216659 19216659 + unknown germline . no 219 .
srip8046 chr10 23054686 23054686 . unknown germline . no 219 .
srip8386 chr10 25707677 25707677 - unknown germline . no 219 GPR158
srip8997 chr10 59508864 59508864 + unknown germline . no 219 .
srip9800 chr10 82972200 82972200 . unknown germline . no 219 .
srip10591 chr10 91717640 91717640 - unknown germline . no 219 .
srip10874 chr10 108993646 108993646 + unknown germline . no 219 .
srip11838 chr10 124455225 124455225 + unknown germline . no 219 .
srip13806 chr11 33670130 33670130 + unknown germline . no 219 C11orf41
srip13987 chr11 40841279 40841279 + unknown germline . no 219 .
srip15390 chr11 58171843 58171843 + unknown germline . no 219 .
srip17173 chr11 94684368 94684368 + unknown germline . no 219 .
srip18239 chr11 112084613 112084613 + unknown germline . no 219 BCO2
srip18639 chr11 131439505 131439505 . unknown germline . no 219 NTM
srip19249 chr11 134305645 134305645 - unknown germline . no 219 .
srip19612 chr12 8105613 8105613 + unknown germline . no 219 .
srip20136 chr12 12933687 12933687 - unknown germline . no 219 APOLD1
srip20364 chr12 22927577 22927577 . unknown germline . no 219 .
srip20737 chr12 28226420 28226420 - unknown germline . no 219 .
srip20897 chr12 33280446 33280446 + unknown germline . no 219 .
srip22236 chr12 43256979 43256979 - unknown germline . no 219 .
srip22828 chr12 48929057 48929057 + unknown germline . no 219 .
srip23504 chr12 71020040 71020040 + unknown germline . no 219 PTPRB
srip25102 chr12 95808453 95808453 - unknown germline . no 219 .
srip26895 chr13 22489798 22489798 + unknown germline . no 219 .
srip27362 chr13 27488117 27488117 + unknown germline . no 219 .
srip29865 chr13 65549229 65549229 - unknown germline . no 219 .
srip30992 chr13 79259790 79259790 - unknown germline . no 219 .
srip31996 chr13 86340151 86340151 - unknown germline . no 219 .
srip32403 chr13 91626228 91626228 + unknown germline . no 219 .
srip33547 chr13 104296230 104296230 - unknown germline . no 219 .
srip35218 chr14 28301256 28301256 + unknown germline . no 219 .
srip35333 chr14 30525250 30525250 . unknown germline . no 219 .
srip35468 chr14 31150817 31150817 - unknown germline . no 219 SCFD1
srip35886 chr14 36674754 36674754 + unknown germline . no 219 .
srip37342 chr14 59220394 59220394 + unknown germline . no 219 .
srip37396 chr14 59522423 59522423 - unknown germline . no 219 .
srip37874 chr14 67419872 67419872 - unknown germline . no 219 GPHN
srip38144 chr14 71197795 71197795 + unknown germline . no 219 MAP3K9
srip38617 chr14 86381802 86381802 - unknown germline . no 219 .
srip38786 chr14 87858408 87858408 + unknown germline . no 219 .
srip39520 chr15 34031845 34031845 - unknown germline . no 219 RYR3
srip39737 chr15 37707890 37707890 - unknown germline . no 219 .
srip39947 chr15 47376100 47376100 + unknown germline . no 219 .
srip41595 chr15 61328966 61328966 - unknown germline . no 219 RORA
srip42254 chr15 77910870 77910870 - unknown germline . no 219 LINGO1
srip42522 chr15 83551628 83551628 - unknown germline . no 219 HOMER2
srip46322 chr16 71028016 71028016 + unknown germline . no 219 HYDIN
srip46492 chr17 2102267 2102267 . unknown germline . no 219 SMG6
srip47196 chr17 28398310 28398310 + unknown germline . no 219 EFCAB5
srip47694 chr17 32813627 32813627 + unknown germline . no 219 .
srip48965 chr18 15095255 15095255 - unknown germline . no 219 .
srip49060 chr18 23467619 23467619 . unknown germline . no 219 .
srip50018 chr18 49216225 49216225 - unknown germline . no 219 .
srip50362 chr18 51425734 51425734 - unknown germline . no 219 .
srip50736 chr18 51762737 51762737 - unknown germline . no 219 .
srip51433 chr18 70522059 70522059 - unknown germline . no 219 NETO1
srip51520 chr18 73290639 73290639 - unknown germline . no 219 .
srip51945 chr19 10839847 10839847 + unknown germline . no 219 DNM2
srip52347 chr19 29223829 29223829 - unknown germline . no 219 .
srip52531 chr19 55509990 55509990 . unknown germline . no 219 NLRP2
srip53464 chr2 23191008 23191008 - unknown germline . no 219 .
srip56714 chr2 101219875 101219875 + unknown germline . no 219 .
srip56866 chr2 106163161 106163161 + unknown germline . no 219 .
srip58242 chr2 141852915 141852915 - unknown germline . no 219 LRP1B
srip58561 chr2 144010786 144010786 + unknown germline . no 219 ARHGAP15
srip59200 chr2 147020925 147020925 + unknown germline . no 219 .
srip59620 chr2 156527835 156527835 + unknown germline . no 219 .
srip60787 chr2 191478707 191478707 - unknown germline . no 219 .
srip61236 chr2 201638076 201638076 + unknown germline . no 219 AOX2P
srip61368 chr2 206147274 206147274 + unknown germline . no 219 PARD3B
srip62673 chr2 238252211 238252211 . unknown germline . no 219 COL6A3
srip63454 chr20 16479499 16479499 - unknown germline . no 219 KIF16B
srip64031 chr20 25895497 25895497 - unknown germline . no 219 .
srip64785 chr20 41952105 41952105 - unknown germline . no 219 .
srip65330 chr20 60132824 60132824 - unknown germline . no 219 CDH4
srip65852 chr21 19517305 19517305 - unknown germline . no 219 .
srip67852 chr22 22715595 22715595 + unknown germline . no 219 IGL@
srip68279 chr22 37127076 37127076 . unknown germline . no 219 .
srip68282 chr22 38636756 38636756 . unknown germline . no 219 TMEM184B
srip68747 chr22 44324597 44324597 - unknown germline . no 219 PNPLA3
srip70044 chr3 14215824 14215824 + unknown germline . no 219 XPC
srip73384 chr3 59852896 59852896 + unknown germline . no 219 FHIT
srip73788 chr3 75101217 75101217 + unknown germline . no 219 .
srip73925 chr3 75728590 75728590 - unknown germline . no 219 .
srip74027 chr3 79216306 79216306 + unknown germline . no 219 ROBO1
srip77263 chr3 123590725 123590725 + unknown germline . no 219 MYLK
srip78956 chr3 156930423 156930423 - unknown germline . no 219 .
srip80348 chr3 176091325 176091325 + unknown germline . no 219 .
srip80864 chr3 181192836 181192836 + unknown germline . no 219 .
srip81499 chr3 186372133 186372133 + unknown germline . no 219 .
srip82976 chr4 18162684 18162684 - unknown germline . no 219 .
srip84693 chr4 47007786 47007786 - unknown germline . no 219 .
srip85764 chr4 58917522 58917522 - unknown germline . no 219 .
srip86347 chr4 66809075 66809075 - unknown germline . no 219 .
srip87486 chr4 81120148 81120148 - unknown germline . no 219 PRDM8
srip87677 chr4 82515385 82515385 . unknown germline . no 219 .
srip90334 chr4 115132698 115132698 + unknown germline . no 219 .
srip92825 chr4 138177331 138177331 + unknown germline . no 219 .
srip95443 chr4 190969819 190969819 + unknown germline . no 219 .
srip96064 chr5 8749521 8749521 + unknown germline . no 219 .
srip96890 chr5 21207721 21207721 + unknown germline . no 219 .
srip97729 chr5 33633341 33633341 - unknown germline . no 219 ADAMTS12
srip99508 chr5 68263468 68263468 - unknown germline . no 219 .
srip100716 chr5 89450774 89450774 + unknown germline . no 219 .
srip103593 chr5 135023720 135023720 . unknown germline . no 219 .
srip103888 chr5 137130151 137130151 - unknown germline . no 219 .
srip104217 chr5 144331004 144331004 . unknown germline . no 219 .
srip104862 chr5 154873935 154873935 - unknown germline . no 219 .
srip105260 chr5 155619871 155619871 . unknown germline . no 219 .
srip105816 chr5 164495152 164495152 - unknown germline . no 219 LOC100507193
srip107784 chr6 26272952 26272952 + unknown germline . no 219 .
srip108696 chr6 46310298 46310298 + unknown germline . no 219 .
srip108983 chr6 57487057 57487057 + unknown germline . no 219 PRIM2
srip109122 chr6 57494221 57494221 - unknown germline . no 219 PRIM2
srip112706 chr6 102283763 102283763 - unknown germline . no 219 GRIK2
srip117867 chr7 57761281 57761281 - unknown germline . no 219 LOC100287663
srip117998 chr7 61980496 61980496 + unknown germline . no 219 .
srip118306 chr7 62492938 62492938 + unknown germline . no 219 .
srip119180 chr7 78284777 78284777 . unknown germline . no 219 MAGI2
srip119826 chr7 84901724 84901724 - unknown germline . no 219 .
srip121171 chr7 107410634 107410634 - unknown germline . no 219 SLC26A3
srip121742 chr7 107829256 107829256 + unknown germline . no 219 NRCAM
srip122017 chr7 108325670 108325670 + unknown germline . no 219 .
srip122557 chr7 118343819 118343819 . unknown germline . no 219 .
srip124385 chr8 5829282 5829282 - unknown germline . no 219 .
srip125448 chr8 24926547 24926547 - unknown germline . no 219 .
srip125779 chr8 40433182 40433182 - unknown germline . no 219 ZMAT4
srip126886 chr8 67381884 67381884 - unknown germline . no 219 .
srip128275 chr8 87315042 87315042 + unknown germline . no 219 .
srip129659 chr8 119721696 119721696 - unknown germline . no 219 SAMD12-AS1
srip130121 chr8 131041225 131041225 + unknown germline . no 219 .
srip131082 chr9 6290487 6290487 + unknown germline . no 219 .
srip131365 chr9 7741401 7741401 + unknown germline . no 219 .
srip132862 chr9 32092741 32092741 - unknown germline . no 219 .
srip133415 chr9 32463891 32463891 - unknown germline . no 219 DDX58
srip133647 chr9 34904794 34904794 - unknown germline . no 219 .
srip134148 chr9 80994250 80994250 . unknown germline . no 219 .
srip134712 chr9 101561004 101561004 . unknown germline . no 219 .
srip135891 chr9 118083874 118083874 - unknown germline . no 219 DEC1
srip137258 chrX 54917144 54917144 + unknown germline . no 219 .
srip140082 chrX 102363181 102363181 + unknown germline . no 219 .
srip140816 chrX 119892837 119892837 - unknown germline . no 219 .
srip141066 chrX 122664864 122664864 - unknown germline . no 219 .
srip141390 chrX 129525276 129525276 - unknown germline . no 219 .